Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav7-2Q5R1I3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-2Q5R1I3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-2Q5R1I3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-2Q5R1I3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-2Q5R1I3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-2Q5R1I3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7-2Q5R1I3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-2Q5R1I3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-2Q5R1I3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7-2Q5R1I3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav7-2Q5R1I3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.91■□□□□ 0.14
Trav7-2Q5R1I3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-2Q5R1I3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-2Q5R1I3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-2Q5R1I3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7-2Q5R1I3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav7-2Q5R1I3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav7-2Q5R1I3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Notumos-201ENSMUST00000151998 2659 ntBASIC15.88■□□□□ 0.13
Trav7-2Q5R1I3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav7-2Q5R1I3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav7-2Q5R1I3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Mir6538-201ENSMUST00000183713 110 ntBASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav7-2Q5R1I3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav7-2Q5R1I3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav7-2Q5R1I3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Gm11175-201ENSMUST00000116172 543 ntBASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7-2Q5R1I3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7-2Q5R1I3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms