Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8d-1Q5R1H8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 Gm4799-201ENSMUST00000095396 657 ntBASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav8d-1Q5R1H8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-1Q5R1H8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-1Q5R1H8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.52■□□□□ 0.4
Trav8d-1Q5R1H8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-1Q5R1H8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav8d-1Q5R1H8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav8d-1Q5R1H8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.51■□□□□ 0.39
Trav8d-1Q5R1H8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-1Q5R1H8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-1Q5R1H8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 Gm6311-201ENSMUST00000073790 878 ntBASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-1Q5R1H8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav8d-1Q5R1H8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav8d-1Q5R1H8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav8d-1Q5R1H8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-1Q5R1H8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-1Q5R1H8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav8d-1Q5R1H8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav8d-1Q5R1H8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-1Q5R1H8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav8d-1Q5R1H8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trav8d-1Q5R1H8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Mir3960-201ENSMUST00000198213 73 ntBASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav8d-1Q5R1H8 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.43■□□□□ 0.38
Trav8d-1Q5R1H8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav8d-1Q5R1H8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms