Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf43Q5NCP0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf43Q5NCP0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf43Q5NCP0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rnf43Q5NCP0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf43Q5NCP0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf43Q5NCP0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf43Q5NCP0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rnf43Q5NCP0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rnf43Q5NCP0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf43Q5NCP0 Gm21956-201ENSMUST00000179946 522 ntBASIC22.1■■□□□ 1.13
Rnf43Q5NCP0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf43Q5NCP0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf43Q5NCP0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.08■■□□□ 1.13
Rnf43Q5NCP0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf43Q5NCP0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Rnf43Q5NCP0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf43Q5NCP0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Rnf43Q5NCP0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Gm12922-201ENSMUST00000120626 809 ntBASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf43Q5NCP0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Rnf43Q5NCP0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf43Q5NCP0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf43Q5NCP0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf43Q5NCP0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf43Q5NCP0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf43Q5NCP0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rnf43Q5NCP0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
Rnf43Q5NCP0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf43Q5NCP0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf43Q5NCP0 Gm10399-202ENSMUST00000202768 748 ntBASIC22.01■■□□□ 1.11
Rnf43Q5NCP0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf43Q5NCP0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf43Q5NCP0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf43Q5NCP0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf43Q5NCP0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf43Q5NCP0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf43Q5NCP0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf43Q5NCP0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rnf43Q5NCP0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms