Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lin28bQ45KJ6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.58■□□□□ 0.89
Lin28bQ45KJ6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Lin28bQ45KJ6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lin28bQ45KJ6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lin28bQ45KJ6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lin28bQ45KJ6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lin28bQ45KJ6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Lin28bQ45KJ6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28bQ45KJ6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lin28bQ45KJ6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Lin28bQ45KJ6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lin28bQ45KJ6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.49■□□□□ 0.87
Lin28bQ45KJ6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lin28bQ45KJ6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.47■□□□□ 0.87
Lin28bQ45KJ6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lin28bQ45KJ6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Lin28bQ45KJ6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lin28bQ45KJ6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms