Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Trim80Q3V061 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.07■■□□□ 1.12
Trim80Q3V061 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trim80Q3V061 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim80Q3V061 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim80Q3V061 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim80Q3V061 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim80Q3V061 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim80Q3V061 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim80Q3V061 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim80Q3V061 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.06■■□□□ 1.12
Trim80Q3V061 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.06■■□□□ 1.12
Trim80Q3V061 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim80Q3V061 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.06■■□□□ 1.12
Trim80Q3V061 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim80Q3V061 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.05■■□□□ 1.12
Trim80Q3V061 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim80Q3V061 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim80Q3V061 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.04■■□□□ 1.12
Trim80Q3V061 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim80Q3V061 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim80Q3V061 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim80Q3V061 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.04■■□□□ 1.12
Trim80Q3V061 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.04■■□□□ 1.12
Trim80Q3V061 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trim80Q3V061 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim80Q3V061 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.03■■□□□ 1.12
Trim80Q3V061 Gm12366-201ENSMUST00000121722 873 ntBASIC22.03■■□□□ 1.12
Trim80Q3V061 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.03■■□□□ 1.12
Trim80Q3V061 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.03■■□□□ 1.12
Trim80Q3V061 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.03■■□□□ 1.12
Trim80Q3V061 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.03■■□□□ 1.12
Trim80Q3V061 Gm5786-201ENSMUST00000085368 882 ntBASIC22.03■■□□□ 1.12
Trim80Q3V061 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim80Q3V061 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim80Q3V061 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Trim80Q3V061 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim80Q3V061 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim80Q3V061 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim80Q3V061 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim80Q3V061 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim80Q3V061 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim80Q3V061 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.01■■□□□ 1.11
Trim80Q3V061 Gm4799-201ENSMUST00000095396 657 ntBASIC22.01■■□□□ 1.11
Trim80Q3V061 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim80Q3V061 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim80Q3V061 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim80Q3V061 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Trim80Q3V061 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim80Q3V061 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Trim80Q3V061 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trim80Q3V061 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Trim80Q3V061 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim80Q3V061 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim80Q3V061 Mir3960-201ENSMUST00000198213 73 ntBASIC21.98■■□□□ 1.11
Trim80Q3V061 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim80Q3V061 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim80Q3V061 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim80Q3V061 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim80Q3V061 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim80Q3V061 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim80Q3V061 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim80Q3V061 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim80Q3V061 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Trim80Q3V061 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim80Q3V061 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.96■■□□□ 1.11
Trim80Q3V061 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim80Q3V061 Gm16437-201ENSMUST00000025669 507 ntBASIC21.96■■□□□ 1.11
Trim80Q3V061 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim80Q3V061 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim80Q3V061 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trim80Q3V061 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim80Q3V061 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim80Q3V061 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim80Q3V061 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.95■■□□□ 1.1
Trim80Q3V061 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Trim80Q3V061 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim80Q3V061 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim80Q3V061 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim80Q3V061 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms