Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks1brtQ3UNC9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks1brtQ3UNC9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks1brtQ3UNC9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cks1brtQ3UNC9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cks1brtQ3UNC9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1brtQ3UNC9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cks1brtQ3UNC9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1brtQ3UNC9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1brtQ3UNC9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cks1brtQ3UNC9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cks1brtQ3UNC9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cks1brtQ3UNC9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cks1brtQ3UNC9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cks1brtQ3UNC9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cks1brtQ3UNC9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cks1brtQ3UNC9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cks1brtQ3UNC9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.58■□□□□ 0.09
Cks1brtQ3UNC9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cks1brtQ3UNC9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1brtQ3UNC9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1brtQ3UNC9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1brtQ3UNC9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1brtQ3UNC9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cks1brtQ3UNC9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cks1brtQ3UNC9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cks1brtQ3UNC9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms