Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
Col5a2Q3U962 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Gm8495-201ENSMUST00000188740 694 ntBASIC26.35■■□□□ 1.81
Col5a2Q3U962 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Col5a2Q3U962 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col5a2Q3U962 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col5a2Q3U962 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col5a2Q3U962 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col5a2Q3U962 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col5a2Q3U962 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col5a2Q3U962 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col5a2Q3U962 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col5a2Q3U962 Gm18284-201ENSMUST00000172604 624 ntBASIC26.3■■□□□ 1.8
Col5a2Q3U962 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.3■■□□□ 1.8
Col5a2Q3U962 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Col5a2Q3U962 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col5a2Q3U962 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col5a2Q3U962 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col5a2Q3U962 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.3■■□□□ 1.8
Col5a2Q3U962 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.29■■□□□ 1.8
Col5a2Q3U962 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col5a2Q3U962 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Col5a2Q3U962 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col5a2Q3U962 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col5a2Q3U962 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Col5a2Q3U962 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col5a2Q3U962 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col5a2Q3U962 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.27■■□□□ 1.8
Col5a2Q3U962 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Col5a2Q3U962 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col5a2Q3U962 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Col5a2Q3U962 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Col5a2Q3U962 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col5a2Q3U962 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
Col5a2Q3U962 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col5a2Q3U962 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col5a2Q3U962 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.25■■□□□ 1.79
Col5a2Q3U962 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.25■■□□□ 1.79
Col5a2Q3U962 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col5a2Q3U962 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Col5a2Q3U962 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.23■■□□□ 1.79
Col5a2Q3U962 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.23■■□□□ 1.79
Col5a2Q3U962 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col5a2Q3U962 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col5a2Q3U962 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.23■■□□□ 1.79
Col5a2Q3U962 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col5a2Q3U962 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col5a2Q3U962 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col5a2Q3U962 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.22■■□□□ 1.79
Col5a2Q3U962 Gm8093-201ENSMUST00000128935 1892 ntBASIC26.21■■□□□ 1.79
Col5a2Q3U962 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.21■■□□□ 1.79
Col5a2Q3U962 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col5a2Q3U962 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col5a2Q3U962 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Col5a2Q3U962 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col5a2Q3U962 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col5a2Q3U962 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.2■■□□□ 1.78
Col5a2Q3U962 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col5a2Q3U962 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col5a2Q3U962 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Col5a2Q3U962 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.19■■□□□ 1.78
Col5a2Q3U962 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.19■■□□□ 1.78
Col5a2Q3U962 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Col5a2Q3U962 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col5a2Q3U962 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col5a2Q3U962 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col5a2Q3U962 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col5a2Q3U962 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col5a2Q3U962 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.16■■□□□ 1.78
Col5a2Q3U962 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col5a2Q3U962 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.16■■□□□ 1.78
Col5a2Q3U962 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms