Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cln6Q3U466 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cln6Q3U466 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln6Q3U466 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.3■□□□□ 0.52
Cln6Q3U466 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln6Q3U466 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cln6Q3U466 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Cln6Q3U466 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cln6Q3U466 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cln6Q3U466 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.29■□□□□ 0.52
Cln6Q3U466 Terc-201ENSMUST00000082862 423 ntBASIC18.29■□□□□ 0.52
Cln6Q3U466 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.29■□□□□ 0.52
Cln6Q3U466 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cln6Q3U466 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cln6Q3U466 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cln6Q3U466 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.28■□□□□ 0.52
Cln6Q3U466 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cln6Q3U466 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln6Q3U466 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln6Q3U466 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln6Q3U466 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cln6Q3U466 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.27■□□□□ 0.51
Cln6Q3U466 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.26■□□□□ 0.51
Cln6Q3U466 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Gm11599-201ENSMUST00000118720 878 ntBASIC18.26■□□□□ 0.51
Cln6Q3U466 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cln6Q3U466 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Cln6Q3U466 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
Cln6Q3U466 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.25■□□□□ 0.51
Cln6Q3U466 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.25■□□□□ 0.51
Cln6Q3U466 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cln6Q3U466 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cln6Q3U466 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cln6Q3U466 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cln6Q3U466 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cln6Q3U466 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cln6Q3U466 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.23■□□□□ 0.51
Cln6Q3U466 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cln6Q3U466 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cln6Q3U466 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cln6Q3U466 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cln6Q3U466 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.21■□□□□ 0.51
Cln6Q3U466 Gm45364-201ENSMUST00000210883 159 ntBASIC18.21■□□□□ 0.51
Cln6Q3U466 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cln6Q3U466 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cln6Q3U466 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cln6Q3U466 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cln6Q3U466 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cln6Q3U466 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln6Q3U466 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Cln6Q3U466 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cln6Q3U466 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.2■□□□□ 0.5
Cln6Q3U466 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cln6Q3U466 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.19■□□□□ 0.5
Cln6Q3U466 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cln6Q3U466 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cln6Q3U466 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln6Q3U466 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Cln6Q3U466 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln6Q3U466 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.18■□□□□ 0.5
Cln6Q3U466 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln6Q3U466 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cln6Q3U466 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cln6Q3U466 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms