Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tff1Q08423 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.81■□□□□ 0.44
Tff1Q08423 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tff1Q08423 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.81■□□□□ 0.44
Tff1Q08423 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tff1Q08423 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tff1Q08423 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.81■□□□□ 0.44
Tff1Q08423 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tff1Q08423 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tff1Q08423 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tff1Q08423 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.79■□□□□ 0.44
Tff1Q08423 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tff1Q08423 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.79■□□□□ 0.44
Tff1Q08423 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tff1Q08423 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tff1Q08423 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tff1Q08423 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tff1Q08423 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tff1Q08423 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.79■□□□□ 0.44
Tff1Q08423 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tff1Q08423 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tff1Q08423 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tff1Q08423 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tff1Q08423 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tff1Q08423 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tff1Q08423 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tff1Q08423 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tff1Q08423 Gm15039-201ENSMUST00000118914 875 ntBASIC17.77■□□□□ 0.44
Tff1Q08423 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tff1Q08423 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tff1Q08423 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tff1Q08423 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tff1Q08423 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.76■□□□□ 0.43
Tff1Q08423 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tff1Q08423 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.76■□□□□ 0.43
Tff1Q08423 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tff1Q08423 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tff1Q08423 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tff1Q08423 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.75■□□□□ 0.43
Tff1Q08423 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tff1Q08423 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Tff1Q08423 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff1Q08423 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.74■□□□□ 0.43
Tff1Q08423 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.74■□□□□ 0.43
Tff1Q08423 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff1Q08423 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tff1Q08423 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tff1Q08423 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tff1Q08423 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tff1Q08423 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tff1Q08423 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Tff1Q08423 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
Tff1Q08423 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.72■□□□□ 0.43
Tff1Q08423 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tff1Q08423 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.72■□□□□ 0.43
Tff1Q08423 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tff1Q08423 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tff1Q08423 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tff1Q08423 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tff1Q08423 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff1Q08423 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tff1Q08423 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.71■□□□□ 0.43
Tff1Q08423 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.71■□□□□ 0.43
Tff1Q08423 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tff1Q08423 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff1Q08423 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff1Q08423 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tff1Q08423 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Tff1Q08423 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tff1Q08423 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Tff1Q08423 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tff1Q08423 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms