Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.88■□□□□ 0.77
Col10a1Q05306 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col10a1Q05306 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col10a1Q05306 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col10a1Q05306 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col10a1Q05306 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col10a1Q05306 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col10a1Q05306 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Col10a1Q05306 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.86■□□□□ 0.77
Col10a1Q05306 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col10a1Q05306 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Col10a1Q05306 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Col10a1Q05306 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col10a1Q05306 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Col10a1Q05306 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col10a1Q05306 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col10a1Q05306 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col10a1Q05306 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.83■□□□□ 0.77
Col10a1Q05306 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.83■□□□□ 0.77
Col10a1Q05306 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Col10a1Q05306 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col10a1Q05306 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col10a1Q05306 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.82■□□□□ 0.76
Col10a1Q05306 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col10a1Q05306 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.81■□□□□ 0.76
Col10a1Q05306 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.81■□□□□ 0.76
Col10a1Q05306 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.81■□□□□ 0.76
Col10a1Q05306 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col10a1Q05306 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.8■□□□□ 0.76
Col10a1Q05306 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.8■□□□□ 0.76
Col10a1Q05306 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col10a1Q05306 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col10a1Q05306 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.79■□□□□ 0.76
Col10a1Q05306 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.79■□□□□ 0.76
Col10a1Q05306 Gm5921-201ENSMUST00000075898 882 ntBASIC19.79■□□□□ 0.76
Col10a1Q05306 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col10a1Q05306 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col10a1Q05306 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col10a1Q05306 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col10a1Q05306 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Col10a1Q05306 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Col10a1Q05306 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col10a1Q05306 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.78■□□□□ 0.76
Col10a1Q05306 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col10a1Q05306 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col10a1Q05306 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Col10a1Q05306 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col10a1Q05306 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Col10a1Q05306 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col10a1Q05306 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col10a1Q05306 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col10a1Q05306 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Col10a1Q05306 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col10a1Q05306 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.77■□□□□ 0.76
Col10a1Q05306 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col10a1Q05306 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.77■□□□□ 0.76
Col10a1Q05306 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col10a1Q05306 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.77■□□□□ 0.76
Col10a1Q05306 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms