Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc1P98083 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc1P98083 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shc1P98083 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shc1P98083 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shc1P98083 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shc1P98083 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shc1P98083 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Shc1P98083 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.41■□□□□ 0.7
Shc1P98083 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.41■□□□□ 0.7
Shc1P98083 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shc1P98083 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shc1P98083 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shc1P98083 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Shc1P98083 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Shc1P98083 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc1P98083 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shc1P98083 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shc1P98083 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shc1P98083 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shc1P98083 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Shc1P98083 Gm22567-201ENSMUST00000175542 342 ntBASIC19.39■□□□□ 0.69
Shc1P98083 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shc1P98083 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.38■□□□□ 0.69
Shc1P98083 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shc1P98083 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
Shc1P98083 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
Shc1P98083 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shc1P98083 Gm5921-201ENSMUST00000075898 882 ntBASIC19.38■□□□□ 0.69
Shc1P98083 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Shc1P98083 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc1P98083 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc1P98083 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc1P98083 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shc1P98083 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shc1P98083 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shc1P98083 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.36■□□□□ 0.69
Shc1P98083 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shc1P98083 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Gm13238-201ENSMUST00000117655 780 ntBASIC19.35■□□□□ 0.69
Shc1P98083 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.35■□□□□ 0.69
Shc1P98083 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shc1P98083 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Shc1P98083 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Shc1P98083 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.34■□□□□ 0.69
Shc1P98083 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shc1P98083 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shc1P98083 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Shc1P98083 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Shc1P98083 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.33■□□□□ 0.68
Shc1P98083 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc1P98083 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Shc1P98083 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shc1P98083 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shc1P98083 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shc1P98083 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Shc1P98083 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shc1P98083 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.31■□□□□ 0.68
Shc1P98083 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.31■□□□□ 0.68
Shc1P98083 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc1P98083 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.31■□□□□ 0.68
Shc1P98083 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shc1P98083 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc1P98083 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shc1P98083 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.3■□□□□ 0.68
Shc1P98083 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shc1P98083 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms