Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1bP97952 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn1bP97952 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn1bP97952 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1bP97952 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1bP97952 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1bP97952 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1bP97952 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scn1bP97952 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn1bP97952 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scn1bP97952 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Scn1bP97952 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn1bP97952 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Scn1bP97952 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Scn1bP97952 Nkain2-201ENSMUST00000092602 558 ntBASIC19.64■□□□□ 0.73
Scn1bP97952 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1bP97952 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn1bP97952 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Scn1bP97952 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Scn1bP97952 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.63■□□□□ 0.73
Scn1bP97952 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn1bP97952 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1bP97952 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.62■□□□□ 0.73
Scn1bP97952 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.62■□□□□ 0.73
Scn1bP97952 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn1bP97952 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.61■□□□□ 0.73
Scn1bP97952 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn1bP97952 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Scn1bP97952 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn1bP97952 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn1bP97952 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn1bP97952 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn1bP97952 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Scn1bP97952 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Scn1bP97952 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Scn1bP97952 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1bP97952 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.59■□□□□ 0.73
Scn1bP97952 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scn1bP97952 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.58■□□□□ 0.73
Scn1bP97952 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scn1bP97952 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Scn1bP97952 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.58■□□□□ 0.72
Scn1bP97952 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.58■□□□□ 0.72
Scn1bP97952 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.58■□□□□ 0.72
Scn1bP97952 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scn1bP97952 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.58■□□□□ 0.72
Scn1bP97952 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.57■□□□□ 0.72
Scn1bP97952 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Scn1bP97952 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1bP97952 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1bP97952 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scn1bP97952 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn1bP97952 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1bP97952 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1bP97952 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1bP97952 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.56■□□□□ 0.72
Scn1bP97952 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.56■□□□□ 0.72
Scn1bP97952 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1bP97952 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scn1bP97952 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1bP97952 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1bP97952 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Scn1bP97952 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1bP97952 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Scn1bP97952 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scn1bP97952 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scn1bP97952 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scn1bP97952 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms