Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smn1P97801 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.46■□□□□ 0.55
Smn1P97801 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 Mir3960-201ENSMUST00000198213 73 ntBASIC18.46■□□□□ 0.55
Smn1P97801 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smn1P97801 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smn1P97801 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smn1P97801 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.45■□□□□ 0.54
Smn1P97801 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.45■□□□□ 0.54
Smn1P97801 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.45■□□□□ 0.54
Smn1P97801 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smn1P97801 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smn1P97801 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smn1P97801 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.45■□□□□ 0.54
Smn1P97801 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smn1P97801 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smn1P97801 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smn1P97801 Terc-201ENSMUST00000082862 423 ntBASIC18.44■□□□□ 0.54
Smn1P97801 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.44■□□□□ 0.54
Smn1P97801 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smn1P97801 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smn1P97801 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Gm8503-201ENSMUST00000118131 455 ntBASIC18.43■□□□□ 0.54
Smn1P97801 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.43■□□□□ 0.54
Smn1P97801 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smn1P97801 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smn1P97801 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smn1P97801 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Smn1P97801 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smn1P97801 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smn1P97801 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smn1P97801 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smn1P97801 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smn1P97801 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smn1P97801 Gm45364-201ENSMUST00000210883 159 ntBASIC18.41■□□□□ 0.54
Smn1P97801 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smn1P97801 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smn1P97801 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smn1P97801 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smn1P97801 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smn1P97801 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smn1P97801 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Smn1P97801 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smn1P97801 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smn1P97801 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.4■□□□□ 0.54
Smn1P97801 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Smn1P97801 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smn1P97801 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Smn1P97801 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smn1P97801 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smn1P97801 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.39■□□□□ 0.53
Smn1P97801 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smn1P97801 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.39■□□□□ 0.53
Smn1P97801 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smn1P97801 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Smn1P97801 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Smn1P97801 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.38■□□□□ 0.53
Smn1P97801 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.38■□□□□ 0.53
Smn1P97801 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smn1P97801 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Smn1P97801 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smn1P97801 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.38■□□□□ 0.53
Smn1P97801 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Smn1P97801 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smn1P97801 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smn1P97801 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smn1P97801 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smn1P97801 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smn1P97801 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.36■□□□□ 0.53
Smn1P97801 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.36■□□□□ 0.53
Smn1P97801 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.36■□□□□ 0.53
Smn1P97801 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.36■□□□□ 0.53
Smn1P97801 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smn1P97801 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smn1P97801 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smn1P97801 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms