Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Six5P70178 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Six5P70178 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Six5P70178 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Six5P70178 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.17■□□□□ 0.82
Six5P70178 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six5P70178 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.17■□□□□ 0.82
Six5P70178 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Six5P70178 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Six5P70178 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six5P70178 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six5P70178 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.16■□□□□ 0.82
Six5P70178 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Six5P70178 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.16■□□□□ 0.82
Six5P70178 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six5P70178 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Six5P70178 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.15■□□□□ 0.82
Six5P70178 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six5P70178 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.14■□□□□ 0.81
Six5P70178 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.14■□□□□ 0.81
Six5P70178 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Six5P70178 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six5P70178 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.13■□□□□ 0.81
Six5P70178 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.13■□□□□ 0.81
Six5P70178 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Six5P70178 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six5P70178 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six5P70178 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Six5P70178 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six5P70178 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Six5P70178 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Six5P70178 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.11■□□□□ 0.81
Six5P70178 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six5P70178 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Six5P70178 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Six5P70178 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six5P70178 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Six5P70178 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six5P70178 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six5P70178 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.09■□□□□ 0.81
Six5P70178 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six5P70178 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six5P70178 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six5P70178 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Six5P70178 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.08■□□□□ 0.81
Six5P70178 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Six5P70178 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Six5P70178 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Six5P70178 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Six5P70178 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Six5P70178 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.08■□□□□ 0.81
Six5P70178 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Six5P70178 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.08■□□□□ 0.8
Six5P70178 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Six5P70178 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six5P70178 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six5P70178 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six5P70178 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six5P70178 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six5P70178 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Six5P70178 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six5P70178 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Six5P70178 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six5P70178 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms