Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.73■■□□□ 1.07
ThraP63058 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ThraP63058 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ThraP63058 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ThraP63058 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ThraP63058 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ThraP63058 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ThraP63058 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ThraP63058 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.72■■□□□ 1.07
ThraP63058 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.71■■□□□ 1.07
ThraP63058 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ThraP63058 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ThraP63058 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ThraP63058 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ThraP63058 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ThraP63058 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ThraP63058 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ThraP63058 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ThraP63058 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ThraP63058 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ThraP63058 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
ThraP63058 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.69■■□□□ 1.06
ThraP63058 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.69■■□□□ 1.06
ThraP63058 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ThraP63058 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.69■■□□□ 1.06
ThraP63058 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ThraP63058 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.69■■□□□ 1.06
ThraP63058 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ThraP63058 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.69■■□□□ 1.06
ThraP63058 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ThraP63058 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.68■■□□□ 1.06
ThraP63058 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ThraP63058 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ThraP63058 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.68■■□□□ 1.06
ThraP63058 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ThraP63058 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.67■■□□□ 1.06
ThraP63058 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ThraP63058 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ThraP63058 Gm15546-201ENSMUST00000122095 826 ntBASIC21.67■■□□□ 1.06
ThraP63058 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.67■■□□□ 1.06
ThraP63058 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.67■■□□□ 1.06
ThraP63058 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.67■■□□□ 1.06
ThraP63058 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ThraP63058 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ThraP63058 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ThraP63058 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ThraP63058 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ThraP63058 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ThraP63058 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ThraP63058 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ThraP63058 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ThraP63058 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ThraP63058 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ThraP63058 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ThraP63058 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ThraP63058 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ThraP63058 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ThraP63058 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ThraP63058 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ThraP63058 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ThraP63058 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ThraP63058 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ThraP63058 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.63■■□□□ 1.05
ThraP63058 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ThraP63058 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.62■■□□□ 1.05
ThraP63058 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ThraP63058 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ThraP63058 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.62■■□□□ 1.05
ThraP63058 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.62■■□□□ 1.05
ThraP63058 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ThraP63058 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ThraP63058 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ThraP63058 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ThraP63058 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ThraP63058 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ThraP63058 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ThraP63058 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ThraP63058 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ThraP63058 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ThraP63058 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
ThraP63058 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ThraP63058 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.59■■□□□ 1.05
ThraP63058 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Gm22567-201ENSMUST00000175542 342 ntBASIC21.59■■□□□ 1.05
ThraP63058 Gm43566-201ENSMUST00000196851 808 ntBASIC21.59■■□□□ 1.05
ThraP63058 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.59■■□□□ 1.05
ThraP63058 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
ThraP63058 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.59■■□□□ 1.05
ThraP63058 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ThraP63058 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ThraP63058 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ThraP63058 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ThraP63058 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
ThraP63058 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ThraP63058 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ThraP63058 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms