Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Msh6P54276 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Msh6P54276 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Msh6P54276 Gm13241-201ENSMUST00000094493 780 ntBASIC27.92■■■□□ 2.06
Msh6P54276 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Msh6P54276 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Msh6P54276 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.91■■■□□ 2.06
Msh6P54276 Gm7417-201ENSMUST00000192950 473 ntBASIC27.91■■■□□ 2.06
Msh6P54276 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Msh6P54276 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
Msh6P54276 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Msh6P54276 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Msh6P54276 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Msh6P54276 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.9■■■□□ 2.06
Msh6P54276 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.9■■■□□ 2.06
Msh6P54276 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Msh6P54276 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Msh6P54276 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Msh6P54276 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Msh6P54276 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.89■■■□□ 2.05
Msh6P54276 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC27.88■■■□□ 2.05
Msh6P54276 Nsd1-206ENSMUST00000224918 1001 ntBASIC27.88■■■□□ 2.05
Msh6P54276 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Msh6P54276 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Msh6P54276 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Msh6P54276 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
Msh6P54276 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Msh6P54276 Gm21956-201ENSMUST00000179946 522 ntBASIC27.85■■■□□ 2.05
Msh6P54276 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.85■■■□□ 2.05
Msh6P54276 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
Msh6P54276 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Msh6P54276 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Msh6P54276 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.83■■■□□ 2.05
Msh6P54276 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Msh6P54276 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Msh6P54276 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Msh6P54276 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.83■■■□□ 2.05
Msh6P54276 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.82■■■□□ 2.04
Msh6P54276 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Msh6P54276 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.82■■■□□ 2.04
Msh6P54276 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Msh6P54276 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Msh6P54276 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Msh6P54276 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Msh6P54276 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Msh6P54276 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Msh6P54276 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Msh6P54276 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Msh6P54276 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC27.8■■■□□ 2.04
Msh6P54276 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Msh6P54276 Gm22238-201ENSMUST00000175222 88 ntBASIC27.8■■■□□ 2.04
Msh6P54276 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.8■■■□□ 2.04
Msh6P54276 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.8■■■□□ 2.04
Msh6P54276 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Msh6P54276 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Msh6P54276 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Msh6P54276 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Msh6P54276 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Msh6P54276 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.79■■■□□ 2.04
Msh6P54276 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Msh6P54276 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Msh6P54276 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Msh6P54276 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Msh6P54276 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Msh6P54276 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Msh6P54276 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.78■■■□□ 2.04
Msh6P54276 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.78■■■□□ 2.04
Msh6P54276 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Msh6P54276 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
Msh6P54276 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Msh6P54276 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Msh6P54276 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC27.77■■■□□ 2.04
Msh6P54276 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Msh6P54276 Gm9847-201ENSMUST00000052528 599 ntBASIC27.76■■■□□ 2.03
Msh6P54276 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Msh6P54276 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Msh6P54276 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Msh6P54276 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Msh6P54276 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
Msh6P54276 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Msh6P54276 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Msh6P54276 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Msh6P54276 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Msh6P54276 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Msh6P54276 Gm40881-201ENSMUST00000223397 166 ntBASIC27.73■■■□□ 2.03
Msh6P54276 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.73■■■□□ 2.03
Msh6P54276 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Msh6P54276 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Msh6P54276 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC27.73■■■□□ 2.03
Msh6P54276 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms