Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox1P53783 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sox1P53783 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox1P53783 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Sox1P53783 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.58■■□□□ 1.21
Sox1P53783 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.58■■□□□ 1.21
Sox1P53783 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox1P53783 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.57■■□□□ 1.2
Sox1P53783 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.57■■□□□ 1.2
Sox1P53783 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.57■■□□□ 1.2
Sox1P53783 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox1P53783 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox1P53783 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox1P53783 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox1P53783 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Sox1P53783 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Sox1P53783 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sox1P53783 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sox1P53783 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
Sox1P53783 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.56■■□□□ 1.2
Sox1P53783 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sox1P53783 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox1P53783 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Sox1P53783 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox1P53783 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox1P53783 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox1P53783 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.54■■□□□ 1.2
Sox1P53783 Gm26571-201ENSMUST00000181399 666 ntBASIC22.54■■□□□ 1.2
Sox1P53783 Gm43017-201ENSMUST00000198296 752 ntBASIC22.54■■□□□ 1.2
Sox1P53783 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.54■■□□□ 1.2
Sox1P53783 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.54■■□□□ 1.2
Sox1P53783 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.54■■□□□ 1.2
Sox1P53783 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sox1P53783 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sox1P53783 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.53■■□□□ 1.2
Sox1P53783 Gm10399-202ENSMUST00000202768 748 ntBASIC22.53■■□□□ 1.2
Sox1P53783 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox1P53783 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Sox1P53783 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.53■■□□□ 1.2
Sox1P53783 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Sox1P53783 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sox1P53783 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.52■■□□□ 1.2
Sox1P53783 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox1P53783 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Sox1P53783 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox1P53783 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox1P53783 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Sox1P53783 Zxda-201ENSMUST00000117281 2621 ntBASIC22.51■■□□□ 1.19
Sox1P53783 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox1P53783 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.5■■□□□ 1.19
Sox1P53783 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox1P53783 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.5■■□□□ 1.19
Sox1P53783 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox1P53783 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox1P53783 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox1P53783 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox1P53783 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sox1P53783 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sox1P53783 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox1P53783 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox1P53783 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Sox1P53783 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sox1P53783 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox1P53783 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox1P53783 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sox1P53783 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.47■■□□□ 1.19
Sox1P53783 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox1P53783 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.46■■□□□ 1.19
Sox1P53783 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox1P53783 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sox1P53783 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sox1P53783 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox1P53783 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox1P53783 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Sox1P53783 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Sox1P53783 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox1P53783 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sox1P53783 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Sox1P53783 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Gm27405-201ENSMUST00000184201 112 ntBASIC22.43■■□□□ 1.18
Sox1P53783 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox1P53783 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sox1P53783 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sox1P53783 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox1P53783 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.41■■□□□ 1.18
Sox1P53783 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sox1P53783 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.41■■□□□ 1.18
Sox1P53783 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Sox1P53783 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.41■■□□□ 1.18
Sox1P53783 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms