Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.38■■□□□ 1.01
Lbx1P52955 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lbx1P52955 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lbx1P52955 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lbx1P52955 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lbx1P52955 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lbx1P52955 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lbx1P52955 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lbx1P52955 Gm37179-201ENSMUST00000194862 823 ntBASIC21.36■■□□□ 1.01
Lbx1P52955 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.35■■□□□ 1.01
Lbx1P52955 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lbx1P52955 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lbx1P52955 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lbx1P52955 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lbx1P52955 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.34■■□□□ 1.01
Lbx1P52955 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lbx1P52955 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lbx1P52955 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lbx1P52955 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lbx1P52955 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.33■■□□□ 1.01
Lbx1P52955 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lbx1P52955 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lbx1P52955 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lbx1P52955 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lbx1P52955 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.32■■□□□ 1
Lbx1P52955 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.32■■□□□ 1
Lbx1P52955 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lbx1P52955 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.31■■□□□ 1
Lbx1P52955 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lbx1P52955 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Lbx1P52955 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lbx1P52955 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lbx1P52955 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lbx1P52955 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lbx1P52955 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.3■■□□□ 1
Lbx1P52955 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.29■■□□□ 1
Lbx1P52955 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Lbx1P52955 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Lbx1P52955 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lbx1P52955 Gm10399-202ENSMUST00000202768 748 ntBASIC21.28■■□□□ 1
Lbx1P52955 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lbx1P52955 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lbx1P52955 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lbx1P52955 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lbx1P52955 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.27■■□□□ 1
Lbx1P52955 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lbx1P52955 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Lbx1P52955 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Lbx1P52955 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lbx1P52955 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.26■□□□□ 0.99
Lbx1P52955 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lbx1P52955 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.26■□□□□ 0.99
Lbx1P52955 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.26■□□□□ 0.99
Lbx1P52955 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.26■□□□□ 0.99
Lbx1P52955 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.26■□□□□ 0.99
Lbx1P52955 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.26■□□□□ 0.99
Lbx1P52955 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lbx1P52955 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lbx1P52955 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lbx1P52955 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lbx1P52955 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.25■□□□□ 0.99
Lbx1P52955 Mir7075-201ENSMUST00000184187 82 ntBASIC21.25■□□□□ 0.99
Lbx1P52955 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.25■□□□□ 0.99
Lbx1P52955 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lbx1P52955 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lbx1P52955 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.24■□□□□ 0.99
Lbx1P52955 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lbx1P52955 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.23■□□□□ 0.99
Lbx1P52955 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.23■□□□□ 0.99
Lbx1P52955 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lbx1P52955 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lbx1P52955 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lbx1P52955 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lbx1P52955 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lbx1P52955 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lbx1P52955 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
Lbx1P52955 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lbx1P52955 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.21■□□□□ 0.99
Lbx1P52955 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lbx1P52955 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lbx1P52955 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lbx1P52955 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lbx1P52955 Gm43137-201ENSMUST00000198052 594 ntBASIC21.2■□□□□ 0.98
Lbx1P52955 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.2■□□□□ 0.98
Lbx1P52955 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lbx1P52955 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.19■□□□□ 0.98
Lbx1P52955 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lbx1P52955 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lbx1P52955 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lbx1P52955 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Lbx1P52955 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lbx1P52955 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms