Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
RoraP51448 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RoraP51448 Gm45102-201ENSMUST00000207427 857 ntBASIC20.41■□□□□ 0.86
RoraP51448 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.41■□□□□ 0.86
RoraP51448 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.41■□□□□ 0.86
RoraP51448 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.41■□□□□ 0.86
RoraP51448 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RoraP51448 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RoraP51448 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RoraP51448 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RoraP51448 Gm10232-201ENSMUST00000089221 720 ntBASIC20.4■□□□□ 0.86
RoraP51448 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RoraP51448 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RoraP51448 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RoraP51448 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RoraP51448 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RoraP51448 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RoraP51448 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.39■□□□□ 0.85
RoraP51448 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RoraP51448 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.39■□□□□ 0.85
RoraP51448 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RoraP51448 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RoraP51448 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RoraP51448 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RoraP51448 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RoraP51448 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.38■□□□□ 0.85
RoraP51448 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RoraP51448 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.38■□□□□ 0.85
RoraP51448 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.37■□□□□ 0.85
RoraP51448 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RoraP51448 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RoraP51448 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RoraP51448 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RoraP51448 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RoraP51448 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RoraP51448 Gm9959-201ENSMUST00000068277 390 ntBASIC20.36■□□□□ 0.85
RoraP51448 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RoraP51448 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RoraP51448 Gm14117-201ENSMUST00000122417 843 ntBASIC20.35■□□□□ 0.85
RoraP51448 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RoraP51448 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RoraP51448 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.35■□□□□ 0.85
RoraP51448 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RoraP51448 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RoraP51448 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RoraP51448 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RoraP51448 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.33■□□□□ 0.85
RoraP51448 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RoraP51448 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.33■□□□□ 0.85
RoraP51448 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
RoraP51448 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RoraP51448 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RoraP51448 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RoraP51448 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RoraP51448 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RoraP51448 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RoraP51448 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RoraP51448 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RoraP51448 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RoraP51448 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RoraP51448 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RoraP51448 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.3■□□□□ 0.84
RoraP51448 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RoraP51448 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.3■□□□□ 0.84
RoraP51448 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.3■□□□□ 0.84
RoraP51448 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RoraP51448 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RoraP51448 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.3■□□□□ 0.84
RoraP51448 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RoraP51448 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RoraP51448 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RoraP51448 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RoraP51448 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
RoraP51448 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RoraP51448 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RoraP51448 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RoraP51448 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RoraP51448 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RoraP51448 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RoraP51448 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.28■□□□□ 0.84
RoraP51448 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RoraP51448 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RoraP51448 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RoraP51448 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RoraP51448 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RoraP51448 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RoraP51448 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.26■□□□□ 0.83
RoraP51448 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RoraP51448 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms