Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prox1P48437 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.58■□□□□ 0.89
Prox1P48437 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Prox1P48437 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Prox1P48437 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Prox1P48437 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Prox1P48437 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prox1P48437 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.57■□□□□ 0.88
Prox1P48437 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prox1P48437 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.57■□□□□ 0.88
Prox1P48437 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.57■□□□□ 0.88
Prox1P48437 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prox1P48437 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.56■□□□□ 0.88
Prox1P48437 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.56■□□□□ 0.88
Prox1P48437 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prox1P48437 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Prox1P48437 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prox1P48437 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prox1P48437 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prox1P48437 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prox1P48437 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Prox1P48437 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.55■□□□□ 0.88
Prox1P48437 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prox1P48437 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prox1P48437 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prox1P48437 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prox1P48437 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.54■□□□□ 0.88
Prox1P48437 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prox1P48437 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prox1P48437 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Prox1P48437 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Prox1P48437 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prox1P48437 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prox1P48437 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prox1P48437 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Prox1P48437 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prox1P48437 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prox1P48437 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Prox1P48437 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prox1P48437 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.52■□□□□ 0.88
Prox1P48437 Gm9812-201ENSMUST00000061934 968 ntBASIC20.52■□□□□ 0.88
Prox1P48437 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.52■□□□□ 0.88
Prox1P48437 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prox1P48437 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Prox1P48437 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prox1P48437 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.51■□□□□ 0.87
Prox1P48437 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prox1P48437 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Prox1P48437 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.5■□□□□ 0.87
Prox1P48437 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prox1P48437 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prox1P48437 Gm7432-201ENSMUST00000210343 879 ntBASIC20.5■□□□□ 0.87
Prox1P48437 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.5■□□□□ 0.87
Prox1P48437 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prox1P48437 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prox1P48437 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Prox1P48437 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prox1P48437 Mir3960-201ENSMUST00000198213 73 ntBASIC20.49■□□□□ 0.87
Prox1P48437 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.49■□□□□ 0.87
Prox1P48437 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prox1P48437 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.49■□□□□ 0.87
Prox1P48437 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prox1P48437 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prox1P48437 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Prox1P48437 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Prox1P48437 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prox1P48437 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prox1P48437 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prox1P48437 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prox1P48437 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prox1P48437 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prox1P48437 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prox1P48437 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prox1P48437 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Prox1P48437 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prox1P48437 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.46■□□□□ 0.87
Prox1P48437 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Prox1P48437 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.46■□□□□ 0.87
Prox1P48437 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Prox1P48437 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prox1P48437 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.46■□□□□ 0.87
Prox1P48437 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prox1P48437 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Prox1P48437 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prox1P48437 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prox1P48437 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prox1P48437 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms