Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli1P47806 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gli1P47806 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gli1P47806 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli1P47806 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli1P47806 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli1P47806 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli1P47806 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gli1P47806 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.9■□□□□ 0.94
Gli1P47806 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gli1P47806 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gli1P47806 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gli1P47806 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Gli1P47806 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Gli1P47806 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gli1P47806 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.89■□□□□ 0.93
Gli1P47806 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gli1P47806 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gli1P47806 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gli1P47806 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.87■□□□□ 0.93
Gli1P47806 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.87■□□□□ 0.93
Gli1P47806 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.87■□□□□ 0.93
Gli1P47806 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gli1P47806 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gli1P47806 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gli1P47806 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gli1P47806 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Gli1P47806 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.86■□□□□ 0.93
Gli1P47806 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Gli1P47806 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gli1P47806 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gli1P47806 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.85■□□□□ 0.93
Gli1P47806 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gli1P47806 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.85■□□□□ 0.93
Gli1P47806 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gli1P47806 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gli1P47806 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gli1P47806 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gli1P47806 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Gli1P47806 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Gli1P47806 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gli1P47806 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Gli1P47806 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gli1P47806 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gli1P47806 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gli1P47806 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.83■□□□□ 0.93
Gli1P47806 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gli1P47806 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.82■□□□□ 0.92
Gli1P47806 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gli1P47806 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.82■□□□□ 0.92
Gli1P47806 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Gli1P47806 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.82■□□□□ 0.92
Gli1P47806 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli1P47806 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gli1P47806 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.81■□□□□ 0.92
Gli1P47806 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Gli1P47806 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli1P47806 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gli1P47806 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gli1P47806 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Gli1P47806 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.8■□□□□ 0.92
Gli1P47806 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.8■□□□□ 0.92
Gli1P47806 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gli1P47806 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gli1P47806 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.78■□□□□ 0.92
Gli1P47806 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms