Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Foxa2P35583 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.19■□□□□ 0.5
Foxa2P35583 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa2P35583 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.19■□□□□ 0.5
Foxa2P35583 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Foxa2P35583 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa2P35583 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Foxa2P35583 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.18■□□□□ 0.5
Foxa2P35583 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Foxa2P35583 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa2P35583 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Foxa2P35583 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.18■□□□□ 0.5
Foxa2P35583 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Foxa2P35583 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa2P35583 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa2P35583 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa2P35583 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.17■□□□□ 0.5
Foxa2P35583 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.17■□□□□ 0.5
Foxa2P35583 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Foxa2P35583 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa2P35583 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa2P35583 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa2P35583 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa2P35583 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Foxa2P35583 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.15■□□□□ 0.5
Foxa2P35583 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Foxa2P35583 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Foxa2P35583 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Foxa2P35583 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.14■□□□□ 0.49
Foxa2P35583 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Foxa2P35583 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.14■□□□□ 0.49
Foxa2P35583 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa2P35583 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa2P35583 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.13■□□□□ 0.49
Foxa2P35583 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Foxa2P35583 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa2P35583 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.13■□□□□ 0.49
Foxa2P35583 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.13■□□□□ 0.49
Foxa2P35583 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa2P35583 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Foxa2P35583 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.12■□□□□ 0.49
Foxa2P35583 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Foxa2P35583 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa2P35583 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa2P35583 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.12■□□□□ 0.49
Foxa2P35583 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.12■□□□□ 0.49
Foxa2P35583 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa2P35583 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Foxa2P35583 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Foxa2P35583 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa2P35583 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Foxa2P35583 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa2P35583 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa2P35583 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Foxa2P35583 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa2P35583 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxa2P35583 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Foxa2P35583 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa2P35583 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa2P35583 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxa2P35583 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.1■□□□□ 0.49
Foxa2P35583 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.1■□□□□ 0.49
Foxa2P35583 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Foxa2P35583 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Foxa2P35583 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa2P35583 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa2P35583 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa2P35583 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa2P35583 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxa2P35583 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 Gm11175-201ENSMUST00000116172 543 ntBASIC18.08■□□□□ 0.48
Foxa2P35583 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.08■□□□□ 0.48
Foxa2P35583 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Foxa2P35583 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxa2P35583 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Foxa2P35583 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Foxa2P35583 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms