Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf9P20334 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf9P20334 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf9P20334 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf9P20334 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf9P20334 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Serp2-204ENSMUST00000228055 705 ntBASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Gm10232-201ENSMUST00000089221 720 ntBASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf9P20334 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Notumos-201ENSMUST00000151998 2659 ntBASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf9P20334 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf9P20334 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf9P20334 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf9P20334 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf9P20334 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.3■□□□□ 0.36
Tnfrsf9P20334 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.3■□□□□ 0.36
Tnfrsf9P20334 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf9P20334 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tnfrsf9P20334 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf9P20334 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf9P20334 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.27■□□□□ 0.36
Tnfrsf9P20334 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf9P20334 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfrsf9P20334 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Tnfrsf9P20334 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfrsf9P20334 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf9P20334 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf9P20334 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf9P20334 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf9P20334 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf9P20334 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf9P20334 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tnfrsf9P20334 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf9P20334 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf9P20334 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf9P20334 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf9P20334 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf9P20334 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf9P20334 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf9P20334 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms