Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Irf1P15314 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf1P15314 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf1P15314 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.74■□□□□ 0.75
Irf1P15314 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Irf1P15314 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.74■□□□□ 0.75
Irf1P15314 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf1P15314 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
Irf1P15314 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf1P15314 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Irf1P15314 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf1P15314 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Irf1P15314 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Irf1P15314 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Irf1P15314 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Irf1P15314 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Irf1P15314 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Irf1P15314 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf1P15314 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Irf1P15314 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Irf1P15314 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.71■□□□□ 0.75
Irf1P15314 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Irf1P15314 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Irf1P15314 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.7■□□□□ 0.74
Irf1P15314 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Irf1P15314 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.7■□□□□ 0.74
Irf1P15314 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Irf1P15314 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf1P15314 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.69■□□□□ 0.74
Irf1P15314 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Irf1P15314 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Irf1P15314 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf1P15314 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Irf1P15314 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Irf1P15314 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Irf1P15314 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Irf1P15314 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Irf1P15314 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.67■□□□□ 0.74
Irf1P15314 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.67■□□□□ 0.74
Irf1P15314 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Irf1P15314 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Irf1P15314 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Irf1P15314 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Irf1P15314 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Irf1P15314 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.66■□□□□ 0.74
Irf1P15314 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Irf1P15314 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Irf1P15314 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf1P15314 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf1P15314 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Irf1P15314 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Irf1P15314 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.64■□□□□ 0.74
Irf1P15314 Gm5812-201ENSMUST00000061073 957 ntBASIC19.64■□□□□ 0.73
Irf1P15314 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.64■□□□□ 0.73
Irf1P15314 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Irf1P15314 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.63■□□□□ 0.73
Irf1P15314 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Irf1P15314 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Irf1P15314 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Irf1P15314 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Irf1P15314 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Irf1P15314 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Irf1P15314 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Irf1P15314 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms