Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl1P12850 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl1P12850 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl1P12850 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cxcl1P12850 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cxcl1P12850 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.9■□□□□ 0.46
Cxcl1P12850 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cxcl1P12850 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cxcl1P12850 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.89■□□□□ 0.45
Cxcl1P12850 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cxcl1P12850 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cxcl1P12850 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.88■□□□□ 0.45
Cxcl1P12850 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cxcl1P12850 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl1P12850 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl1P12850 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl1P12850 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cxcl1P12850 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cxcl1P12850 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.88■□□□□ 0.45
Cxcl1P12850 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cxcl1P12850 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl1P12850 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cxcl1P12850 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cxcl1P12850 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cxcl1P12850 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.87■□□□□ 0.45
Cxcl1P12850 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.87■□□□□ 0.45
Cxcl1P12850 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cxcl1P12850 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl1P12850 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cxcl1P12850 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl1P12850 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.85■□□□□ 0.45
Cxcl1P12850 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cxcl1P12850 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cxcl1P12850 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cxcl1P12850 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
Cxcl1P12850 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.84■□□□□ 0.45
Cxcl1P12850 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl1P12850 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Cxcl1P12850 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl1P12850 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl1P12850 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cxcl1P12850 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl1P12850 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl1P12850 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cxcl1P12850 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl1P12850 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl1P12850 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl1P12850 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl1P12850 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl1P12850 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.81■□□□□ 0.44
Cxcl1P12850 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cxcl1P12850 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl1P12850 Gm7432-201ENSMUST00000210343 879 ntBASIC17.81■□□□□ 0.44
Cxcl1P12850 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl1P12850 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cxcl1P12850 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl1P12850 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl1P12850 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl1P12850 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.8■□□□□ 0.44
Cxcl1P12850 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl1P12850 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.79■□□□□ 0.44
Cxcl1P12850 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.79■□□□□ 0.44
Cxcl1P12850 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl1P12850 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.78■□□□□ 0.44
Cxcl1P12850 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Cxcl1P12850 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Gm11599-201ENSMUST00000118720 878 ntBASIC17.78■□□□□ 0.44
Cxcl1P12850 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cxcl1P12850 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cxcl1P12850 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cxcl1P12850 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms