Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PtcraP0C6B2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PtcraP0C6B2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PtcraP0C6B2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PtcraP0C6B2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PtcraP0C6B2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PtcraP0C6B2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PtcraP0C6B2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PtcraP0C6B2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.79■□□□□ 0.6
PtcraP0C6B2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
PtcraP0C6B2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.78■□□□□ 0.6
PtcraP0C6B2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.78■□□□□ 0.6
PtcraP0C6B2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.78■□□□□ 0.6
PtcraP0C6B2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.78■□□□□ 0.6
PtcraP0C6B2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PtcraP0C6B2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PtcraP0C6B2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PtcraP0C6B2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PtcraP0C6B2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.77■□□□□ 0.6
PtcraP0C6B2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PtcraP0C6B2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PtcraP0C6B2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PtcraP0C6B2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.76■□□□□ 0.59
PtcraP0C6B2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PtcraP0C6B2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.76■□□□□ 0.59
PtcraP0C6B2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PtcraP0C6B2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PtcraP0C6B2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PtcraP0C6B2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PtcraP0C6B2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PtcraP0C6B2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PtcraP0C6B2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PtcraP0C6B2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PtcraP0C6B2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.74■□□□□ 0.59
PtcraP0C6B2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PtcraP0C6B2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PtcraP0C6B2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PtcraP0C6B2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PtcraP0C6B2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.72■□□□□ 0.59
PtcraP0C6B2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PtcraP0C6B2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PtcraP0C6B2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PtcraP0C6B2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.71■□□□□ 0.59
PtcraP0C6B2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PtcraP0C6B2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PtcraP0C6B2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PtcraP0C6B2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PtcraP0C6B2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PtcraP0C6B2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.68■□□□□ 0.58
PtcraP0C6B2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PtcraP0C6B2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PtcraP0C6B2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PtcraP0C6B2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PtcraP0C6B2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.67■□□□□ 0.58
PtcraP0C6B2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PtcraP0C6B2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms