Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
NefmP08553 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC31.97■■■□□ 2.71
NefmP08553 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.97■■■□□ 2.71
NefmP08553 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NefmP08553 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NefmP08553 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NefmP08553 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NefmP08553 Gm42418-201ENSMUST00000182010 1831 ntBASIC31.96■■■□□ 2.71
NefmP08553 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
NefmP08553 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NefmP08553 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
NefmP08553 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
NefmP08553 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
NefmP08553 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
NefmP08553 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
NefmP08553 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
NefmP08553 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC31.94■■■□□ 2.7
NefmP08553 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
NefmP08553 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
NefmP08553 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
NefmP08553 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NefmP08553 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
NefmP08553 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
NefmP08553 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
NefmP08553 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NefmP08553 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NefmP08553 Gm12504-201ENSMUST00000120860 2231 ntBASIC31.92■■■□□ 2.7
NefmP08553 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NefmP08553 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.91■■■□□ 2.7
NefmP08553 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
NefmP08553 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NefmP08553 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NefmP08553 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
NefmP08553 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NefmP08553 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
NefmP08553 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
NefmP08553 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC31.88■■■□□ 2.69
NefmP08553 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
NefmP08553 Gm43006-201ENSMUST00000197702 1602 ntBASIC31.86■■■□□ 2.69
NefmP08553 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
NefmP08553 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NefmP08553 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NefmP08553 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NefmP08553 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC31.85■■■□□ 2.69
NefmP08553 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
NefmP08553 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
NefmP08553 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
NefmP08553 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
NefmP08553 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NefmP08553 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
NefmP08553 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NefmP08553 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NefmP08553 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC31.83■■■□□ 2.69
NefmP08553 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NefmP08553 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
NefmP08553 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.82■■■□□ 2.69
NefmP08553 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NefmP08553 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
NefmP08553 Gm44428-201ENSMUST00000204474 874 ntBASIC31.82■■■□□ 2.68
NefmP08553 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
NefmP08553 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NefmP08553 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NefmP08553 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NefmP08553 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
NefmP08553 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NefmP08553 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NefmP08553 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NefmP08553 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NefmP08553 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NefmP08553 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NefmP08553 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.79■■■□□ 2.68
NefmP08553 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC31.79■■■□□ 2.68
NefmP08553 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NefmP08553 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
NefmP08553 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
NefmP08553 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.78■■■□□ 2.68
NefmP08553 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.78■■■□□ 2.68
NefmP08553 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
NefmP08553 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
NefmP08553 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC31.76■■■□□ 2.68
NefmP08553 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
NefmP08553 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.68
NefmP08553 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
NefmP08553 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NefmP08553 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NefmP08553 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.75■■■□□ 2.67
NefmP08553 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NefmP08553 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NefmP08553 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms