Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.21■□□□□ 0.99
Apoa4P06728 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Apoa4P06728 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apoa4P06728 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apoa4P06728 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apoa4P06728 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Apoa4P06728 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Apoa4P06728 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Apoa4P06728 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apoa4P06728 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apoa4P06728 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Apoa4P06728 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apoa4P06728 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Apoa4P06728 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Apoa4P06728 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Apoa4P06728 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Apoa4P06728 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.19■□□□□ 0.98
Apoa4P06728 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Apoa4P06728 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Apoa4P06728 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.18■□□□□ 0.98
Apoa4P06728 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Apoa4P06728 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Apoa4P06728 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Apoa4P06728 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Gm9806-201ENSMUST00000051080 552 ntBASIC21.17■□□□□ 0.98
Apoa4P06728 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Apoa4P06728 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Apoa4P06728 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apoa4P06728 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apoa4P06728 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Apoa4P06728 Gm44428-201ENSMUST00000204474 874 ntBASIC21.16■□□□□ 0.98
Apoa4P06728 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.16■□□□□ 0.98
Apoa4P06728 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Apoa4P06728 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.15■□□□□ 0.98
Apoa4P06728 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Apoa4P06728 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Apoa4P06728 Scarna2-201ENSMUST00000157560 414 ntBASIC21.14■□□□□ 0.97
Apoa4P06728 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Apoa4P06728 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Apoa4P06728 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apoa4P06728 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.13■□□□□ 0.97
Apoa4P06728 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apoa4P06728 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Apoa4P06728 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Apoa4P06728 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Apoa4P06728 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.12■□□□□ 0.97
Apoa4P06728 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.11■□□□□ 0.97
Apoa4P06728 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.11■□□□□ 0.97
Apoa4P06728 Gm11687-201ENSMUST00000118911 886 ntBASIC21.11■□□□□ 0.97
Apoa4P06728 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.11■□□□□ 0.97
Apoa4P06728 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Apoa4P06728 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Apoa4P06728 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apoa4P06728 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apoa4P06728 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
Apoa4P06728 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Apoa4P06728 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Apoa4P06728 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Apoa4P06728 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apoa4P06728 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.09■□□□□ 0.97
Apoa4P06728 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Apoa4P06728 Gm16437-201ENSMUST00000025669 507 ntBASIC21.09■□□□□ 0.97
Apoa4P06728 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Apoa4P06728 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.09■□□□□ 0.97
Apoa4P06728 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Apoa4P06728 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Apoa4P06728 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apoa4P06728 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Apoa4P06728 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apoa4P06728 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Apoa4P06728 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.08■□□□□ 0.96
Apoa4P06728 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Apoa4P06728 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apoa4P06728 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.07■□□□□ 0.96
Apoa4P06728 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.07■□□□□ 0.96
Apoa4P06728 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Apoa4P06728 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apoa4P06728 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Apoa4P06728 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apoa4P06728 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Apoa4P06728 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.06■□□□□ 0.96
Apoa4P06728 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms