Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm9847-201ENSMUST00000052528 599 ntBASIC22.72■■□□□ 1.23
PrnpP04925 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PrnpP04925 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PrnpP04925 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PrnpP04925 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PrnpP04925 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PrnpP04925 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PrnpP04925 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.71■■□□□ 1.23
PrnpP04925 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PrnpP04925 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PrnpP04925 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.7■■□□□ 1.22
PrnpP04925 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.7■■□□□ 1.22
PrnpP04925 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PrnpP04925 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PrnpP04925 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PrnpP04925 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.69■■□□□ 1.22
PrnpP04925 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PrnpP04925 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.69■■□□□ 1.22
PrnpP04925 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PrnpP04925 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PrnpP04925 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PrnpP04925 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PrnpP04925 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PrnpP04925 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PrnpP04925 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PrnpP04925 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PrnpP04925 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PrnpP04925 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PrnpP04925 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.66■■□□□ 1.22
PrnpP04925 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
PrnpP04925 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PrnpP04925 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PrnpP04925 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.66■■□□□ 1.22
PrnpP04925 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PrnpP04925 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PrnpP04925 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PrnpP04925 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.64■■□□□ 1.22
PrnpP04925 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PrnpP04925 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PrnpP04925 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.64■■□□□ 1.21
PrnpP04925 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PrnpP04925 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.63■■□□□ 1.21
PrnpP04925 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PrnpP04925 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PrnpP04925 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PrnpP04925 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PrnpP04925 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.62■■□□□ 1.21
PrnpP04925 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PrnpP04925 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.62■■□□□ 1.21
PrnpP04925 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PrnpP04925 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PrnpP04925 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PrnpP04925 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PrnpP04925 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PrnpP04925 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PrnpP04925 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PrnpP04925 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Gm12922-201ENSMUST00000120626 809 ntBASIC22.59■■□□□ 1.21
PrnpP04925 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PrnpP04925 Gm21956-201ENSMUST00000179946 522 ntBASIC22.58■■□□□ 1.21
PrnpP04925 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PrnpP04925 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PrnpP04925 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PrnpP04925 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
PrnpP04925 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PrnpP04925 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PrnpP04925 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PrnpP04925 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.56■■□□□ 1.2
PrnpP04925 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.56■■□□□ 1.2
PrnpP04925 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PrnpP04925 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.56■■□□□ 1.2
PrnpP04925 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.56■■□□□ 1.2
PrnpP04925 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PrnpP04925 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PrnpP04925 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
PrnpP04925 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PrnpP04925 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PrnpP04925 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PrnpP04925 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.55■■□□□ 1.2
PrnpP04925 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms