Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ifna1P01572 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ifna1P01572 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Ifna1P01572 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.17■□□□□ 0.5
Ifna1P01572 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ifna1P01572 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ifna1P01572 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ifna1P01572 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ifna1P01572 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.16■□□□□ 0.5
Ifna1P01572 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.16■□□□□ 0.5
Ifna1P01572 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ifna1P01572 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ifna1P01572 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ifna1P01572 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ifna1P01572 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ifna1P01572 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ifna1P01572 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ifna1P01572 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.14■□□□□ 0.5
Ifna1P01572 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.14■□□□□ 0.49
Ifna1P01572 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Ifna1P01572 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.14■□□□□ 0.49
Ifna1P01572 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ifna1P01572 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ifna1P01572 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ifna1P01572 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.13■□□□□ 0.49
Ifna1P01572 Mir3960-201ENSMUST00000198213 73 ntBASIC18.13■□□□□ 0.49
Ifna1P01572 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.13■□□□□ 0.49
Ifna1P01572 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ifna1P01572 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ifna1P01572 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.12■□□□□ 0.49
Ifna1P01572 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ifna1P01572 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ifna1P01572 Terc-201ENSMUST00000082862 423 ntBASIC18.12■□□□□ 0.49
Ifna1P01572 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.12■□□□□ 0.49
Ifna1P01572 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ifna1P01572 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ifna1P01572 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ifna1P01572 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.11■□□□□ 0.49
Ifna1P01572 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.11■□□□□ 0.49
Ifna1P01572 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ifna1P01572 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.11■□□□□ 0.49
Ifna1P01572 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ifna1P01572 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ifna1P01572 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
Ifna1P01572 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ifna1P01572 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ifna1P01572 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ifna1P01572 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.09■□□□□ 0.49
Ifna1P01572 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ifna1P01572 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Ifna1P01572 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ifna1P01572 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ifna1P01572 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.08■□□□□ 0.48
Ifna1P01572 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Ifna1P01572 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ifna1P01572 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ifna1P01572 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ifna1P01572 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ifna1P01572 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ifna1P01572 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ifna1P01572 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ifna1P01572 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ifna1P01572 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ifna1P01572 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.06■□□□□ 0.48
Ifna1P01572 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ifna1P01572 Gm8503-201ENSMUST00000118131 455 ntBASIC18.06■□□□□ 0.48
Ifna1P01572 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.06■□□□□ 0.48
Ifna1P01572 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ifna1P01572 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.06■□□□□ 0.48
Ifna1P01572 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ifna1P01572 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ifna1P01572 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Ifna1P01572 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ifna1P01572 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms