Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Col5a1O88207 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col5a1O88207 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Col5a1O88207 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col5a1O88207 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col5a1O88207 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col5a1O88207 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Col5a1O88207 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col5a1O88207 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col5a1O88207 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.93■□□□□ 0.78
Col5a1O88207 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.93■□□□□ 0.78
Col5a1O88207 Gm29257-201ENSMUST00000186115 639 ntBASIC19.92■□□□□ 0.78
Col5a1O88207 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.92■□□□□ 0.78
Col5a1O88207 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.92■□□□□ 0.78
Col5a1O88207 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.92■□□□□ 0.78
Col5a1O88207 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a1O88207 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col5a1O88207 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Col5a1O88207 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a1O88207 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a1O88207 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col5a1O88207 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.9■□□□□ 0.78
Col5a1O88207 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col5a1O88207 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col5a1O88207 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.89■□□□□ 0.78
Col5a1O88207 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.89■□□□□ 0.77
Col5a1O88207 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.89■□□□□ 0.77
Col5a1O88207 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col5a1O88207 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col5a1O88207 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col5a1O88207 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col5a1O88207 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Col5a1O88207 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col5a1O88207 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col5a1O88207 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.87■□□□□ 0.77
Col5a1O88207 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col5a1O88207 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col5a1O88207 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col5a1O88207 Gm12922-201ENSMUST00000120626 809 ntBASIC19.87■□□□□ 0.77
Col5a1O88207 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col5a1O88207 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.87■□□□□ 0.77
Col5a1O88207 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.87■□□□□ 0.77
Col5a1O88207 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.87■□□□□ 0.77
Col5a1O88207 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col5a1O88207 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.86■□□□□ 0.77
Col5a1O88207 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.86■□□□□ 0.77
Col5a1O88207 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Col5a1O88207 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Gm12821-201ENSMUST00000120022 600 ntBASIC19.86■□□□□ 0.77
Col5a1O88207 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col5a1O88207 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col5a1O88207 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.85■□□□□ 0.77
Col5a1O88207 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Col5a1O88207 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
Col5a1O88207 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.84■□□□□ 0.77
Col5a1O88207 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col5a1O88207 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col5a1O88207 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col5a1O88207 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.83■□□□□ 0.77
Col5a1O88207 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col5a1O88207 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col5a1O88207 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Col5a1O88207 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a1O88207 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a1O88207 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a1O88207 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a1O88207 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col5a1O88207 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Gm18284-201ENSMUST00000172604 624 ntBASIC19.81■□□□□ 0.76
Col5a1O88207 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Col5a1O88207 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col5a1O88207 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col5a1O88207 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms