Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pknox1O70477 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pknox1O70477 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pknox1O70477 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pknox1O70477 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pknox1O70477 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.38■■□□□ 1.01
Pknox1O70477 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pknox1O70477 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
Pknox1O70477 Gm16437-201ENSMUST00000025669 507 ntBASIC21.38■■□□□ 1.01
Pknox1O70477 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pknox1O70477 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Pknox1O70477 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pknox1O70477 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.37■■□□□ 1.01
Pknox1O70477 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.37■■□□□ 1.01
Pknox1O70477 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.37■■□□□ 1.01
Pknox1O70477 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pknox1O70477 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pknox1O70477 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pknox1O70477 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.36■■□□□ 1.01
Pknox1O70477 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pknox1O70477 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pknox1O70477 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.35■■□□□ 1.01
Pknox1O70477 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.35■■□□□ 1.01
Pknox1O70477 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pknox1O70477 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pknox1O70477 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pknox1O70477 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pknox1O70477 Gm11687-201ENSMUST00000118911 886 ntBASIC21.34■■□□□ 1.01
Pknox1O70477 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pknox1O70477 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pknox1O70477 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pknox1O70477 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pknox1O70477 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pknox1O70477 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Pknox1O70477 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pknox1O70477 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pknox1O70477 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Pknox1O70477 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Pknox1O70477 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pknox1O70477 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pknox1O70477 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pknox1O70477 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pknox1O70477 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pknox1O70477 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.32■■□□□ 1
Pknox1O70477 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pknox1O70477 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pknox1O70477 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pknox1O70477 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.31■■□□□ 1
Pknox1O70477 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pknox1O70477 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pknox1O70477 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pknox1O70477 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pknox1O70477 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pknox1O70477 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pknox1O70477 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pknox1O70477 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pknox1O70477 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.3■■□□□ 1
Pknox1O70477 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pknox1O70477 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.3■■□□□ 1
Pknox1O70477 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pknox1O70477 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pknox1O70477 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pknox1O70477 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pknox1O70477 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pknox1O70477 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pknox1O70477 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pknox1O70477 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pknox1O70477 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Pknox1O70477 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pknox1O70477 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pknox1O70477 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pknox1O70477 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pknox1O70477 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pknox1O70477 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pknox1O70477 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pknox1O70477 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.27■■□□□ 1
Pknox1O70477 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms