Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim1O70400 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pdlim1O70400 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pdlim1O70400 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim1O70400 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim1O70400 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.39■■□□□ 1.01
Pdlim1O70400 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.39■■□□□ 1.01
Pdlim1O70400 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim1O70400 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim1O70400 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Gm45444-201ENSMUST00000211394 898 ntBASIC21.38■■□□□ 1.01
Pdlim1O70400 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim1O70400 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim1O70400 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim1O70400 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.37■■□□□ 1.01
Pdlim1O70400 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim1O70400 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim1O70400 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Pdlim1O70400 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim1O70400 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim1O70400 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim1O70400 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim1O70400 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Pdlim1O70400 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim1O70400 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pdlim1O70400 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pdlim1O70400 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pdlim1O70400 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim1O70400 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim1O70400 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.34■■□□□ 1.01
Pdlim1O70400 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.34■■□□□ 1.01
Pdlim1O70400 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim1O70400 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.34■■□□□ 1.01
Pdlim1O70400 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim1O70400 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim1O70400 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim1O70400 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim1O70400 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim1O70400 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim1O70400 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim1O70400 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim1O70400 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim1O70400 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim1O70400 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim1O70400 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.32■■□□□ 1
Pdlim1O70400 Gm43566-201ENSMUST00000196851 808 ntBASIC21.32■■□□□ 1
Pdlim1O70400 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pdlim1O70400 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim1O70400 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pdlim1O70400 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pdlim1O70400 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.31■■□□□ 1
Pdlim1O70400 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim1O70400 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.31■■□□□ 1
Pdlim1O70400 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.3■■□□□ 1
Pdlim1O70400 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pdlim1O70400 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pdlim1O70400 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.29■■□□□ 1
Pdlim1O70400 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pdlim1O70400 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim1O70400 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pdlim1O70400 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim1O70400 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim1O70400 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pdlim1O70400 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pdlim1O70400 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pdlim1O70400 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pdlim1O70400 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.28■■□□□ 1
Pdlim1O70400 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pdlim1O70400 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pdlim1O70400 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim1O70400 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pdlim1O70400 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim1O70400 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms