Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl13O55038 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.39■□□□□ 0.53
Cxcl13O55038 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Cxcl13O55038 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cxcl13O55038 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl13O55038 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cxcl13O55038 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl13O55038 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.38■□□□□ 0.53
Cxcl13O55038 Etf1-202ENSMUST00000180351 108 ntBASIC18.38■□□□□ 0.53
Cxcl13O55038 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cxcl13O55038 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cxcl13O55038 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cxcl13O55038 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl13O55038 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl13O55038 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl13O55038 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl13O55038 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cxcl13O55038 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cxcl13O55038 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl13O55038 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl13O55038 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl13O55038 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cxcl13O55038 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.34■□□□□ 0.53
Cxcl13O55038 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl13O55038 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl13O55038 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.34■□□□□ 0.53
Cxcl13O55038 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.34■□□□□ 0.53
Cxcl13O55038 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl13O55038 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.34■□□□□ 0.53
Cxcl13O55038 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cxcl13O55038 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cxcl13O55038 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cxcl13O55038 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cxcl13O55038 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cxcl13O55038 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.33■□□□□ 0.52
Cxcl13O55038 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.33■□□□□ 0.52
Cxcl13O55038 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.33■□□□□ 0.52
Cxcl13O55038 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cxcl13O55038 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cxcl13O55038 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cxcl13O55038 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl13O55038 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.31■□□□□ 0.52
Cxcl13O55038 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl13O55038 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl13O55038 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.31■□□□□ 0.52
Cxcl13O55038 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl13O55038 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cxcl13O55038 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Cxcl13O55038 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cxcl13O55038 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cxcl13O55038 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cxcl13O55038 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.3■□□□□ 0.52
Cxcl13O55038 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.3■□□□□ 0.52
Cxcl13O55038 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
Cxcl13O55038 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cxcl13O55038 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.29■□□□□ 0.52
Cxcl13O55038 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cxcl13O55038 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cxcl13O55038 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.29■□□□□ 0.52
Cxcl13O55038 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cxcl13O55038 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl13O55038 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl13O55038 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl13O55038 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.28■□□□□ 0.52
Cxcl13O55038 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl13O55038 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cxcl13O55038 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.27■□□□□ 0.52
Cxcl13O55038 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl13O55038 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cxcl13O55038 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms