Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm2O35900 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm2O35900 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm2O35900 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm2O35900 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm2O35900 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm2O35900 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm2O35900 Gm9812-201ENSMUST00000061934 968 ntBASIC19.27■□□□□ 0.68
Lsm2O35900 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm2O35900 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm2O35900 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm2O35900 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm2O35900 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm2O35900 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm2O35900 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm2O35900 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm2O35900 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm2O35900 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.26■□□□□ 0.67
Lsm2O35900 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.26■□□□□ 0.67
Lsm2O35900 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm2O35900 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm2O35900 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm2O35900 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm2O35900 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm2O35900 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.25■□□□□ 0.67
Lsm2O35900 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm2O35900 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm2O35900 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm2O35900 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm2O35900 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Lsm2O35900 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm2O35900 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Lsm2O35900 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm2O35900 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.23■□□□□ 0.67
Lsm2O35900 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm2O35900 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm2O35900 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Lsm2O35900 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Lsm2O35900 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm2O35900 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm2O35900 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lsm2O35900 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm2O35900 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm2O35900 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lsm2O35900 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.21■□□□□ 0.67
Lsm2O35900 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Lsm2O35900 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.2■□□□□ 0.66
Lsm2O35900 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lsm2O35900 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lsm2O35900 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lsm2O35900 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lsm2O35900 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm2O35900 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm2O35900 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm2O35900 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lsm2O35900 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lsm2O35900 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lsm2O35900 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lsm2O35900 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lsm2O35900 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
Lsm2O35900 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lsm2O35900 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
Lsm2O35900 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.16■□□□□ 0.66
Lsm2O35900 Gm4799-201ENSMUST00000095396 657 ntBASIC19.16■□□□□ 0.66
Lsm2O35900 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm2O35900 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lsm2O35900 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.16■□□□□ 0.66
Lsm2O35900 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms