Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.06■□□□□ 0.96
Npc1O35604 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.06■□□□□ 0.96
Npc1O35604 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Npc1O35604 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.06■□□□□ 0.96
Npc1O35604 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Npc1O35604 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Npc1O35604 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1O35604 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1O35604 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1O35604 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1O35604 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1O35604 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1O35604 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Npc1O35604 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 Gm5812-201ENSMUST00000061073 957 ntBASIC21.04■□□□□ 0.96
Npc1O35604 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.04■□□□□ 0.96
Npc1O35604 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Npc1O35604 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1O35604 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Npc1O35604 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1O35604 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Npc1O35604 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1O35604 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1O35604 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Npc1O35604 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Npc1O35604 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.03■□□□□ 0.96
Npc1O35604 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Npc1O35604 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.02■□□□□ 0.96
Npc1O35604 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Npc1O35604 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Npc1O35604 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1O35604 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1O35604 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Npc1O35604 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1O35604 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.01■□□□□ 0.95
Npc1O35604 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.01■□□□□ 0.95
Npc1O35604 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Npc1O35604 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21■□□□□ 0.95
Npc1O35604 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21■□□□□ 0.95
Npc1O35604 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21■□□□□ 0.95
Npc1O35604 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1O35604 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Npc1O35604 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Npc1O35604 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1O35604 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Npc1O35604 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Npc1O35604 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Npc1O35604 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1O35604 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Npc1O35604 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Npc1O35604 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.98■□□□□ 0.95
Npc1O35604 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1O35604 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1O35604 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Npc1O35604 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.97■□□□□ 0.95
Npc1O35604 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1O35604 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1O35604 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Npc1O35604 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1O35604 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1O35604 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1O35604 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1O35604 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.95■□□□□ 0.94
Npc1O35604 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1O35604 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Npc1O35604 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1O35604 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1O35604 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1O35604 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Npc1O35604 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.94■□□□□ 0.94
Npc1O35604 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Npc1O35604 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Npc1O35604 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.94■□□□□ 0.94
Npc1O35604 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Npc1O35604 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1O35604 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1O35604 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1O35604 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Npc1O35604 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1O35604 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1O35604 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1O35604 Gm13238-201ENSMUST00000117655 780 ntBASIC20.91■□□□□ 0.94
Npc1O35604 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms