Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clk4O35493 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.6■□□□□ 0.89
Clk4O35493 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Clk4O35493 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk4O35493 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk4O35493 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clk4O35493 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clk4O35493 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk4O35493 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk4O35493 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk4O35493 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clk4O35493 Gm22567-201ENSMUST00000175542 342 ntBASIC20.58■□□□□ 0.89
Clk4O35493 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Clk4O35493 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clk4O35493 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.58■□□□□ 0.88
Clk4O35493 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.57■□□□□ 0.88
Clk4O35493 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clk4O35493 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.57■□□□□ 0.88
Clk4O35493 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk4O35493 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.57■□□□□ 0.88
Clk4O35493 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clk4O35493 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk4O35493 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clk4O35493 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clk4O35493 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk4O35493 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk4O35493 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.56■□□□□ 0.88
Clk4O35493 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clk4O35493 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clk4O35493 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clk4O35493 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Clk4O35493 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clk4O35493 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clk4O35493 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clk4O35493 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Clk4O35493 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk4O35493 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clk4O35493 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.53■□□□□ 0.88
Clk4O35493 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.53■□□□□ 0.88
Clk4O35493 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clk4O35493 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clk4O35493 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clk4O35493 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clk4O35493 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.5■□□□□ 0.87
Clk4O35493 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.5■□□□□ 0.87
Clk4O35493 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.5■□□□□ 0.87
Clk4O35493 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk4O35493 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Clk4O35493 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Clk4O35493 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.49■□□□□ 0.87
Clk4O35493 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Clk4O35493 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk4O35493 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk4O35493 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk4O35493 Gm5921-201ENSMUST00000075898 882 ntBASIC20.48■□□□□ 0.87
Clk4O35493 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk4O35493 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk4O35493 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk4O35493 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk4O35493 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk4O35493 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk4O35493 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.47■□□□□ 0.87
Clk4O35493 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk4O35493 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.47■□□□□ 0.87
Clk4O35493 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.47■□□□□ 0.87
Clk4O35493 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk4O35493 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Clk4O35493 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.47■□□□□ 0.87
Clk4O35493 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms