Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17■□□□□ 0.31
Efnb3O35393 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Efnb3O35393 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Efnb3O35393 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.99■□□□□ 0.31
Efnb3O35393 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Gm11599-201ENSMUST00000118720 878 ntBASIC16.99■□□□□ 0.31
Efnb3O35393 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Efnb3O35393 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Efnb3O35393 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.99■□□□□ 0.31
Efnb3O35393 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Efnb3O35393 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Efnb3O35393 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.98■□□□□ 0.31
Efnb3O35393 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Efnb3O35393 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Efnb3O35393 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Efnb3O35393 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Efnb3O35393 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Efnb3O35393 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Efnb3O35393 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.98■□□□□ 0.31
Efnb3O35393 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Efnb3O35393 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.97■□□□□ 0.31
Efnb3O35393 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Efnb3O35393 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Efnb3O35393 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Efnb3O35393 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Efnb3O35393 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Efnb3O35393 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Efnb3O35393 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.96■□□□□ 0.31
Efnb3O35393 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Efnb3O35393 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Efnb3O35393 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Efnb3O35393 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.95■□□□□ 0.3
Efnb3O35393 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.95■□□□□ 0.3
Efnb3O35393 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Efnb3O35393 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Efnb3O35393 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Efnb3O35393 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Efnb3O35393 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Efnb3O35393 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Efnb3O35393 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.94■□□□□ 0.3
Efnb3O35393 Gm9812-201ENSMUST00000061934 968 ntBASIC16.94■□□□□ 0.3
Efnb3O35393 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Efnb3O35393 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Efnb3O35393 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Efnb3O35393 Gm4799-201ENSMUST00000095396 657 ntBASIC16.93■□□□□ 0.3
Efnb3O35393 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Efnb3O35393 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Efnb3O35393 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Efnb3O35393 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.92■□□□□ 0.3
Efnb3O35393 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Efnb3O35393 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Efnb3O35393 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.91■□□□□ 0.3
Efnb3O35393 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Efnb3O35393 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Efnb3O35393 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Efnb3O35393 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Efnb3O35393 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms