Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13d-3J3QMG8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13d-3J3QMG8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav13d-3J3QMG8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav13d-3J3QMG8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav13d-3J3QMG8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav13d-3J3QMG8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13d-3J3QMG8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav13d-3J3QMG8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav13d-3J3QMG8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav13d-3J3QMG8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav13d-3J3QMG8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav13d-3J3QMG8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13d-3J3QMG8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13d-3J3QMG8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav13d-3J3QMG8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Cap2-205ENSMUST00000225824 1634 ntBASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Gm10420-201ENSMUST00000121713 882 ntBASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav13d-3J3QMG8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.99■□□□□ 0.63
Trav13d-3J3QMG8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav13d-3J3QMG8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav13d-3J3QMG8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav13d-3J3QMG8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Trav13d-3J3QMG8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13d-3J3QMG8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav13d-3J3QMG8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.95■□□□□ 0.62
Trav13d-3J3QMG8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.95■□□□□ 0.62
Trav13d-3J3QMG8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.94■□□□□ 0.62
Trav13d-3J3QMG8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-3J3QMG8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-3J3QMG8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-3J3QMG8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav13d-3J3QMG8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.92■□□□□ 0.62
Trav13d-3J3QMG8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav13d-3J3QMG8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms