Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdh1F7BJK1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdh1F7BJK1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh1F7BJK1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdh1F7BJK1 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.44■□□□□ 0.7
Pcdh1F7BJK1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh1F7BJK1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh1F7BJK1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdh1F7BJK1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh1F7BJK1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.43■□□□□ 0.7
Pcdh1F7BJK1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh1F7BJK1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Gm11599-201ENSMUST00000118720 878 ntBASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh1F7BJK1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh1F7BJK1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh1F7BJK1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Pcdh1F7BJK1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh1F7BJK1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh1F7BJK1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.39■□□□□ 0.7
Pcdh1F7BJK1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdh1F7BJK1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh1F7BJK1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh1F7BJK1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh1F7BJK1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh1F7BJK1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh1F7BJK1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh1F7BJK1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh1F7BJK1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh1F7BJK1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh1F7BJK1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh1F7BJK1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Pcdh1F7BJK1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh1F7BJK1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh1F7BJK1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh1F7BJK1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh1F7BJK1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.32■□□□□ 0.68
Pcdh1F7BJK1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh1F7BJK1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh1F7BJK1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh1F7BJK1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdh1F7BJK1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms