Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.9□□□□□ -0.66
Rnf213E9Q555 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Rnf213E9Q555 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rnf213E9Q555 Gm43017-201ENSMUST00000198296 752 ntBASIC10.89□□□□□ -0.67
Rnf213E9Q555 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rnf213E9Q555 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rnf213E9Q555 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rnf213E9Q555 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC10.87□□□□□ -0.67
Rnf213E9Q555 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf213E9Q555 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Gm37179-201ENSMUST00000194862 823 ntBASIC10.86□□□□□ -0.67
Rnf213E9Q555 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Gm26571-201ENSMUST00000181399 666 ntBASIC10.86□□□□□ -0.67
Rnf213E9Q555 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rnf213E9Q555 Gm7199-201ENSMUST00000118327 1485 ntBASIC10.86□□□□□ -0.67
Rnf213E9Q555 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf213E9Q555 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.86□□□□□ -0.67
Rnf213E9Q555 Gm8093-201ENSMUST00000128935 1892 ntBASIC10.85□□□□□ -0.67
Rnf213E9Q555 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Gm22325-201ENSMUST00000158904 308 ntBASIC10.85□□□□□ -0.67
Rnf213E9Q555 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf213E9Q555 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC10.85□□□□□ -0.67
Rnf213E9Q555 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.85□□□□□ -0.67
Rnf213E9Q555 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rnf213E9Q555 Nsd1-206ENSMUST00000224918 1001 ntBASIC10.84□□□□□ -0.67
Rnf213E9Q555 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Rnf213E9Q555 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rnf213E9Q555 Gm27405-201ENSMUST00000184201 112 ntBASIC10.82□□□□□ -0.68
Rnf213E9Q555 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.82□□□□□ -0.68
Rnf213E9Q555 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rnf213E9Q555 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rnf213E9Q555 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms