Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Hfm1D3Z4R1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Hfm1D3Z4R1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Hfm1D3Z4R1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Hfm1D3Z4R1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Hfm1D3Z4R1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Hfm1D3Z4R1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Hfm1D3Z4R1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC31.28■■■□□ 2.6
Hfm1D3Z4R1 Gm8093-201ENSMUST00000128935 1892 ntBASIC31.28■■■□□ 2.6
Hfm1D3Z4R1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Hfm1D3Z4R1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Hfm1D3Z4R1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.26■■■□□ 2.6
Hfm1D3Z4R1 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.26■■■□□ 2.6
Hfm1D3Z4R1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Hfm1D3Z4R1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hfm1D3Z4R1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC31.25■■■□□ 2.59
Hfm1D3Z4R1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Hfm1D3Z4R1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Hfm1D3Z4R1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hfm1D3Z4R1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.23■■■□□ 2.59
Hfm1D3Z4R1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Hfm1D3Z4R1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Hfm1D3Z4R1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC31.22■■■□□ 2.59
Hfm1D3Z4R1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Hfm1D3Z4R1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Hfm1D3Z4R1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Hfm1D3Z4R1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Hfm1D3Z4R1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Hfm1D3Z4R1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Hfm1D3Z4R1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Hfm1D3Z4R1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Hfm1D3Z4R1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hfm1D3Z4R1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hfm1D3Z4R1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC31.19■■■□□ 2.58
Hfm1D3Z4R1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC31.19■■■□□ 2.58
Hfm1D3Z4R1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Hfm1D3Z4R1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Hfm1D3Z4R1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC31.17■■■□□ 2.58
Hfm1D3Z4R1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Hfm1D3Z4R1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Hfm1D3Z4R1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Hfm1D3Z4R1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Hfm1D3Z4R1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Hfm1D3Z4R1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.14■■■□□ 2.58
Hfm1D3Z4R1 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.14■■■□□ 2.58
Hfm1D3Z4R1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Hfm1D3Z4R1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.13■■■□□ 2.57
Hfm1D3Z4R1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Hfm1D3Z4R1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hfm1D3Z4R1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Hfm1D3Z4R1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hfm1D3Z4R1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Hfm1D3Z4R1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Hfm1D3Z4R1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Hfm1D3Z4R1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Hfm1D3Z4R1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Hfm1D3Z4R1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Hfm1D3Z4R1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Hfm1D3Z4R1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Hfm1D3Z4R1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Hfm1D3Z4R1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC31.09■■■□□ 2.57
Hfm1D3Z4R1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hfm1D3Z4R1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hfm1D3Z4R1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hfm1D3Z4R1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Hfm1D3Z4R1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Hfm1D3Z4R1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hfm1D3Z4R1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Hfm1D3Z4R1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Hfm1D3Z4R1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Hfm1D3Z4R1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Hfm1D3Z4R1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hfm1D3Z4R1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hfm1D3Z4R1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Hfm1D3Z4R1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Hfm1D3Z4R1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Hfm1D3Z4R1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hfm1D3Z4R1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Hfm1D3Z4R1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hfm1D3Z4R1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hfm1D3Z4R1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hfm1D3Z4R1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Hfm1D3Z4R1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hfm1D3Z4R1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hfm1D3Z4R1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hfm1D3Z4R1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Hfm1D3Z4R1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hfm1D3Z4R1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Hfm1D3Z4R1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms