Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Gm10399-202ENSMUST00000202768 748 ntBASIC18.29■□□□□ 0.52
Col6a4A2AX52 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col6a4A2AX52 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Col6a4A2AX52 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col6a4A2AX52 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col6a4A2AX52 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a4A2AX52 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a4A2AX52 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col6a4A2AX52 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a4A2AX52 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a4A2AX52 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col6a4A2AX52 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Col6a4A2AX52 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a4A2AX52 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a4A2AX52 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.26■□□□□ 0.51
Col6a4A2AX52 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.26■□□□□ 0.51
Col6a4A2AX52 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a4A2AX52 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Col6a4A2AX52 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a4A2AX52 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a4A2AX52 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a4A2AX52 Gm40881-201ENSMUST00000223397 166 ntBASIC18.24■□□□□ 0.51
Col6a4A2AX52 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col6a4A2AX52 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a4A2AX52 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a4A2AX52 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a4A2AX52 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a4A2AX52 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col6a4A2AX52 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Col6a4A2AX52 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Col6a4A2AX52 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col6a4A2AX52 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a4A2AX52 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.2■□□□□ 0.5
Col6a4A2AX52 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Col6a4A2AX52 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a4A2AX52 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.2■□□□□ 0.5
Col6a4A2AX52 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.19■□□□□ 0.5
Col6a4A2AX52 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a4A2AX52 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a4A2AX52 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.18■□□□□ 0.5
Col6a4A2AX52 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a4A2AX52 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col6a4A2AX52 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms