Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Ccdc112A0AUP1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ccdc112A0AUP1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ccdc112A0AUP1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc112A0AUP1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.69■■□□□ 1.54
Ccdc112A0AUP1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc112A0AUP1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc112A0AUP1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc112A0AUP1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc112A0AUP1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC24.68■■□□□ 1.54
Ccdc112A0AUP1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc112A0AUP1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.68■■□□□ 1.54
Ccdc112A0AUP1 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc112A0AUP1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc112A0AUP1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc112A0AUP1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc112A0AUP1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Ccdc112A0AUP1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc112A0AUP1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc112A0AUP1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc112A0AUP1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc112A0AUP1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc112A0AUP1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc112A0AUP1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc112A0AUP1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc112A0AUP1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ccdc112A0AUP1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc112A0AUP1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc112A0AUP1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.62■■□□□ 1.53
Ccdc112A0AUP1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc112A0AUP1 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.62■■□□□ 1.53
Ccdc112A0AUP1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ccdc112A0AUP1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Scarna2-201ENSMUST00000157560 414 ntBASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.6■■□□□ 1.53
Ccdc112A0AUP1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Gm9806-201ENSMUST00000051080 552 ntBASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Ccdc112A0AUP1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc112A0AUP1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.58■■□□□ 1.53
Ccdc112A0AUP1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.58■■□□□ 1.53
Ccdc112A0AUP1 Gm16437-201ENSMUST00000025669 507 ntBASIC24.58■■□□□ 1.53
Ccdc112A0AUP1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc112A0AUP1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ccdc112A0AUP1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc112A0AUP1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc112A0AUP1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.57■■□□□ 1.52
Ccdc112A0AUP1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc112A0AUP1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc112A0AUP1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc112A0AUP1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
Ccdc112A0AUP1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc112A0AUP1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc112A0AUP1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc112A0AUP1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc112A0AUP1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc112A0AUP1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc112A0AUP1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ccdc112A0AUP1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.53■■□□□ 1.52
Ccdc112A0AUP1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.53■■□□□ 1.52
Ccdc112A0AUP1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc112A0AUP1 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.53■■□□□ 1.52
Ccdc112A0AUP1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc112A0AUP1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc112A0AUP1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms