Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm28729A0A1B0GSW2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm28729A0A1B0GSW2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.37■■□□□ 1.01
Gm28729A0A1B0GSW2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.35■■□□□ 1.01
Gm28729A0A1B0GSW2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Gm28729A0A1B0GSW2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gm28729A0A1B0GSW2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm28729A0A1B0GSW2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28729A0A1B0GSW2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm28729A0A1B0GSW2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gm28729A0A1B0GSW2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm28729A0A1B0GSW2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.31■■□□□ 1
Gm28729A0A1B0GSW2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Gm28729A0A1B0GSW2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.29■■□□□ 1
Gm28729A0A1B0GSW2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm28729A0A1B0GSW2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm28729A0A1B0GSW2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.26■□□□□ 0.99
Gm28729A0A1B0GSW2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm28729A0A1B0GSW2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28729A0A1B0GSW2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28729A0A1B0GSW2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm28729A0A1B0GSW2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28729A0A1B0GSW2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm28729A0A1B0GSW2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm28729A0A1B0GSW2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms