Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.79■■□□□ 1.08
Gm3854A0A1B0GSS6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.79■■□□□ 1.08
Gm3854A0A1B0GSS6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3854A0A1B0GSS6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3854A0A1B0GSS6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Gm13241-201ENSMUST00000094493 780 ntBASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3854A0A1B0GSS6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3854A0A1B0GSS6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.77■■□□□ 1.07
Gm3854A0A1B0GSS6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm3854A0A1B0GSS6 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Gm9847-201ENSMUST00000052528 599 ntBASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Gm3854A0A1B0GSS6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm3854A0A1B0GSS6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.73■■□□□ 1.07
Gm3854A0A1B0GSS6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm3854A0A1B0GSS6 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm3854A0A1B0GSS6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Gm3854A0A1B0GSS6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Gm10399-202ENSMUST00000202768 748 ntBASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Gm3854A0A1B0GSS6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gm3854A0A1B0GSS6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm3854A0A1B0GSS6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gm3854A0A1B0GSS6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3854A0A1B0GSS6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3854A0A1B0GSS6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gm3854A0A1B0GSS6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3854A0A1B0GSS6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gm3854A0A1B0GSS6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3854A0A1B0GSS6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3854A0A1B0GSS6 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.66■■□□□ 1.06
Gm3854A0A1B0GSS6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gm3854A0A1B0GSS6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Gm3854A0A1B0GSS6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gm3854A0A1B0GSS6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms