Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC47.1■■■■■ 5.13
Gm35339A0A140LHH9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC47.09■■■■■ 5.13
Gm35339A0A140LHH9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC47.09■■■■■ 5.13
Gm35339A0A140LHH9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC47.09■■■■■ 5.13
Gm35339A0A140LHH9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC47.09■■■■■ 5.13
Gm35339A0A140LHH9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC47.08■■■■■ 5.13
Gm35339A0A140LHH9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC47.08■■■■■ 5.13
Gm35339A0A140LHH9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC47.07■■■■■ 5.13
Gm35339A0A140LHH9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC47.07■■■■■ 5.13
Gm35339A0A140LHH9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC47.06■■■■■ 5.12
Gm35339A0A140LHH9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC47.06■■■■■ 5.12
Gm35339A0A140LHH9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC47.06■■■■■ 5.12
Gm35339A0A140LHH9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC47.06■■■■■ 5.12
Gm35339A0A140LHH9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC47.05■■■■■ 5.12
Gm35339A0A140LHH9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC47.05■■■■■ 5.12
Gm35339A0A140LHH9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC47.05■■■■■ 5.12
Gm35339A0A140LHH9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC47.04■■■■■ 5.12
Gm35339A0A140LHH9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC47.03■■■■■ 5.12
Gm35339A0A140LHH9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC47.03■■■■■ 5.12
Gm35339A0A140LHH9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC47.03■■■■■ 5.12
Gm35339A0A140LHH9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC47.03■■■■■ 5.12
Gm35339A0A140LHH9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC47.02■■■■■ 5.12
Gm35339A0A140LHH9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC47.01■■■■■ 5.12
Gm35339A0A140LHH9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC47■■■■■ 5.12
Gm35339A0A140LHH9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC47■■■■■ 5.11
Gm35339A0A140LHH9 Gm18284-201ENSMUST00000172604 624 ntBASIC47■■■■■ 5.11
Gm35339A0A140LHH9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC46.99■■■■■ 5.11
Gm35339A0A140LHH9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC46.99■■■■■ 5.11
Gm35339A0A140LHH9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC46.99■■■■■ 5.11
Gm35339A0A140LHH9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC46.99■■■■■ 5.11
Gm35339A0A140LHH9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC46.97■■■■■ 5.11
Gm35339A0A140LHH9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC46.97■■■■■ 5.11
Gm35339A0A140LHH9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC46.97■■■■■ 5.11
Gm35339A0A140LHH9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC46.97■■■■■ 5.11
Gm35339A0A140LHH9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC46.96■■■■■ 5.11
Gm35339A0A140LHH9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC46.94■■■■■ 5.11
Gm35339A0A140LHH9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC46.93■■■■■ 5.1
Gm35339A0A140LHH9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC46.92■■■■■ 5.1
Gm35339A0A140LHH9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC46.92■■■■■ 5.1
Gm35339A0A140LHH9 Gm2011-201ENSMUST00000203124 1263 ntBASIC46.92■■■■■ 5.1
Gm35339A0A140LHH9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC46.91■■■■■ 5.1
Gm35339A0A140LHH9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC46.91■■■■■ 5.1
Gm35339A0A140LHH9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC46.91■■■■■ 5.1
Gm35339A0A140LHH9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC46.9■■■■■ 5.1
Gm35339A0A140LHH9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC46.9■■■■■ 5.1
Gm35339A0A140LHH9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC46.9■■■■■ 5.1
Gm35339A0A140LHH9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC46.9■■■■■ 5.1
Gm35339A0A140LHH9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC46.9■■■■■ 5.1
Gm35339A0A140LHH9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC46.89■■■■■ 5.1
Gm35339A0A140LHH9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC46.89■■■■■ 5.1
Gm35339A0A140LHH9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC46.89■■■■■ 5.1
Gm35339A0A140LHH9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC46.89■■■■■ 5.1
Gm35339A0A140LHH9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC46.88■■■■■ 5.1
Gm35339A0A140LHH9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC46.88■■■■■ 5.1
Gm35339A0A140LHH9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC46.88■■■■■ 5.1
Gm35339A0A140LHH9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC46.88■■■■■ 5.09
Gm35339A0A140LHH9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC46.87■■■■■ 5.09
Gm35339A0A140LHH9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC46.87■■■■■ 5.09
Gm35339A0A140LHH9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC46.86■■■■■ 5.09
Gm35339A0A140LHH9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC46.86■■■■■ 5.09
Gm35339A0A140LHH9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 Gm8495-201ENSMUST00000188740 694 ntBASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC46.85■■■■■ 5.09
Gm35339A0A140LHH9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC46.84■■■■■ 5.09
Gm35339A0A140LHH9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC46.83■■■■■ 5.09
Gm35339A0A140LHH9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC46.83■■■■■ 5.09
Gm35339A0A140LHH9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC46.83■■■■■ 5.09
Gm35339A0A140LHH9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC46.83■■■■■ 5.09
Gm35339A0A140LHH9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC46.83■■■■■ 5.09
Gm35339A0A140LHH9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC46.82■■■■■ 5.09
Gm35339A0A140LHH9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC46.82■■■■■ 5.09
Gm35339A0A140LHH9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC46.81■■■■■ 5.08
Gm35339A0A140LHH9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC46.8■■■■■ 5.08
Gm35339A0A140LHH9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC46.8■■■■■ 5.08
Gm35339A0A140LHH9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC46.79■■■■■ 5.08
Gm35339A0A140LHH9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC46.79■■■■■ 5.08
Gm35339A0A140LHH9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC46.79■■■■■ 5.08
Gm35339A0A140LHH9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC46.78■■■■■ 5.08
Gm35339A0A140LHH9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC46.78■■■■■ 5.08
Gm35339A0A140LHH9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC46.77■■■■■ 5.08
Gm35339A0A140LHH9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC46.77■■■■■ 5.08
Gm35339A0A140LHH9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC46.76■■■■■ 5.08
Gm35339A0A140LHH9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC46.76■■■■■ 5.08
Gm35339A0A140LHH9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC46.75■■■■■ 5.07
Gm35339A0A140LHH9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC46.74■■■■■ 5.07
Gm35339A0A140LHH9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC46.74■■■■■ 5.07
Gm35339A0A140LHH9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC46.73■■■■■ 5.07
Gm35339A0A140LHH9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC46.73■■■■■ 5.07
Gm35339A0A140LHH9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC46.73■■■■■ 5.07
Gm35339A0A140LHH9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC46.72■■■■■ 5.07
Retrieved 100 of 76,532 protein–RNA pairs in 164.9 ms