Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Terc-201ENSMUST00000082862 423 ntBASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.77□□□□□ -0.04
Trav13d-4A0A0G2JFX3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-4A0A0G2JFX3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm45364-201ENSMUST00000210883 159 ntBASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm7432-201ENSMUST00000210343 879 ntBASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.73□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav13d-4A0A0G2JFX3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms