Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv19A0A0B4J1H4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv19A0A0B4J1H4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trbv19A0A0B4J1H4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv19A0A0B4J1H4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trbv19A0A0B4J1H4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv19A0A0B4J1H4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.27■□□□□ 0.35
Trbv19A0A0B4J1H4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv19A0A0B4J1H4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv19A0A0B4J1H4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv19A0A0B4J1H4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv19A0A0B4J1H4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv19A0A0B4J1H4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trbv19A0A0B4J1H4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms