Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trbc1A0A0A6YWV4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbc1A0A0A6YWV4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Trbc1A0A0A6YWV4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbc1A0A0A6YWV4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbc1A0A0A6YWV4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbc1A0A0A6YWV4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbc1A0A0A6YWV4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.8■□□□□ 0.76
Trbc1A0A0A6YWV4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbc1A0A0A6YWV4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbc1A0A0A6YWV4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trbc1A0A0A6YWV4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trbc1A0A0A6YWV4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbc1A0A0A6YWV4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbc1A0A0A6YWV4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.75■□□□□ 0.75
Trbc1A0A0A6YWV4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trbc1A0A0A6YWV4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.74■□□□□ 0.75
Trbc1A0A0A6YWV4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Trbc1A0A0A6YWV4 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbc1A0A0A6YWV4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbc1A0A0A6YWV4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbc1A0A0A6YWV4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms